Search results for " Zebrafish"

showing 10 items of 18 documents

Structural, ultrastructural, and morphometric study of the zebrafish ocular surface: a model for human corneal diseases?

2018

Purpose: A morphological and morphometric study of the adult zebrafish ocular surface was performed to provide a comprehensive description of its parts and to evaluate its similarity to the human. Materials and Methods: The eyes of adult zebrafish were processed for light, transmission and scanning electron microscopy, and for immunohistochemical stain of corneal nerves; a morphometric analysis was also performed on several morphological parameters. Results: The corneal epithelium was formed by five layers of cells. No Bowman’s layer could be demonstrated. The stroma consisted of lamellae of different thickness with few keratocytes. The Descemet’s membrane was absent as the flat and polygon…

0301 basic medicineBowman's layer; corneal nerves; Descemet's membrane; ocular surface; Zebrafish; Ophthalmology; Sensory Systems; Cellular and Molecular NeuroscienceConjunctivaCorneal StromaBiologycorneal nerveCorneal DiseasesCornea03 medical and health sciencesCellular and Molecular Neuroscience0302 clinical medicineMicroscopy Electron TransmissionCorneamedicineAnimalsHumansTrigeminal NerveBowman MembraneZebrafishDescemet MembraneZebrafishTrigeminal nerveocular surfaceBowman’s layerCorneal DiseasesEndothelium CornealEpithelium CornealDescemet’s membraneEpithelial CellsAnatomybiology.organism_classificationSensory SystemsDescemet's membraneOphthalmology030104 developmental biologymedicine.anatomical_structureModels Animal030221 ophthalmology & optometryUltrastructureMicroscopy Electron ScanningGoblet CellsBowman MembraneConjunctivaCurrent eye research
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SLC20A1 Is Involved in Urinary Tract and Urorectal Development

2020

Previous studies in developing Xenopus and zebrafish reported that the phosphate transporter slc20a1a is expressed in pronephric kidneys. The recent identification of SLC20A1 as a monoallelic candidate gene for cloacal exstrophy further suggests its involvement in the urinary tract and urorectal development. However, little is known of the functional role of SLC20A1 in urinary tract development. Here, we investigated this using morpholino oligonucleotide knockdown of the zebrafish ortholog slc20a1a. This caused kidney cysts and malformations of the cloaca. Moreover, in morphants we demonstrated dysfunctional voiding and hindgut opening defects mimicking imperforate anus in human cloacal exs…

0301 basic medicineCandidate genePathologyMorpholinoPediatricsEmbryonalentwicklungBlasenekstrophieBladder exstrophyZebrabärbling0302 clinical medicinebladder exstrophy-epispadias complex; CAKUT; cloacal malformation; functional genetics; kidney formation; SLC20A1; urinary tract development; zebrafish developmentbladder exstrophy-epispadias complexUrinary tract; Growth and developmentZebrafishlcsh:QH301-705.5ZebrafishNiereOriginal Researchcloacal malformationKidney; EmbryologyPediatrikzebrafish developmentKidney; Growth and developmentReconstructive and regenerative medicine Radboud Institute for Molecular Life Sciences [Radboudumc 10]030220 oncology & carcinogenesisembryonic structuresfunctional geneticsmedicine.symptomSLC20A1medicine.medical_specialtyEpispadiasanimal structuresUrinary systemBiologyKidney cystsCell and Developmental Biology03 medical and health sciencesAll institutes and research themes of the Radboud University Medical Centermedicineddc:610CAKUTNeurodevelopmental disorders Donders Center for Medical Neuroscience [Radboudumc 7]Cloaca; Abnormalitieskidney formationCell Biologymedicine.diseaseCloacal exstrophybiology.organism_classificationurinary tract developmentReconstructive and regenerative medicine Radboud Institute for Health Sciences [Radboudumc 10]Bladder exstrophy030104 developmental biologyCloaca (embryology)lcsh:Biology (General)Developmental BiologyFrontiers in Cell and Developmental Biology
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Histones, Their Variants and Post-translational Modifications in Zebrafish Development.

2020

Complex multi-cellular organisms are shaped starting from a single-celled zygote, owing to elaborate developmental programs. These programs involve several layers of regulation to orchestrate the establishment of progressively diverging cell type-specific gene expression patterns. In this scenario, epigenetic modifications of chromatin are central in influencing spatiotemporal patterns of gene transcription. In fact, it is generally recognized that epigenetic changes of chromatin states impact on the accessibility of genomic DNA to regulatory proteins. Several lines of evidence highlighted that zebrafish is an excellent vertebrate model for research purposes in the field of developmental ep…

0301 basic medicineHistone-modifying enzymeshistone posttranslational modificationsMini ReviewMorphogenesisSettore BIO/11 - Biologia Molecolarematernal-to-zygotic transitionComparative biologyComputational biologyhistone03 medical and health sciencesCell and Developmental Biology0302 clinical medicineEpigeneticshistone variantsZebrafishlcsh:QH301-705.5developmentzygotic genome activationbiologyepigeneticsCell Biologybiology.organism_classificationzebrafishChromatinhistone histone posttranslational modifications histone variants epigenetics development maternal-to-zygotic transition zygotic genome activation zebrafish030104 developmental biologyHistonelcsh:Biology (General)030220 oncology & carcinogenesisbiology.proteinMaternal to zygotic transitionDevelopmental BiologyFrontiers in cell and developmental biology
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Flexible multi-beam light-sheet fluorescence microscope for live imaging without striping artifacts

2018

The development of light-sheet fluorescence microscopy (LSFM) has greatly expanded the experimental capabilities in many biological and biomedical research fields, enabling for example live studies of murine and zebrafish neural activity or of cell growth and division. The key feature of the method is the selective illumination of a sample single plane, providing an intrinsic optical sectioning and allowing direct 2D image recording. On the other hand, this excitation scheme is more affected by absorption or scattering artifacts in comparison to point scanning methods, leading to un-even illumination. We present here an easily implementable method, based on acousto-optical deflectors (AOD),…

0301 basic medicineMaterials scienceOptical sectioningNeuroscience (miscellaneous)acousto optic deflectorbrain imagingAcousto optic deflector; Brain imaging; Fast volumetric imaging; Light-sheet fluorescence microscopy; Striping artifacts; Zebrafish; Anatomy; Neuroscience (miscellaneous); Cellular and Molecular Neurosciencelight-sheet fluorescence microscopy striping artifacts fast volumetric imaging acousto optic deflector brain imaging zebrafishfast volumetric imaginglcsh:RC321-571lcsh:QM1-69503 medical and health sciencesCellular and Molecular Neuroscience0302 clinical medicineOpticsLive cell imagingFluorescence microscopeTechnology ReportAbsorption (electromagnetic radiation)lcsh:Neurosciences. Biological psychiatry. Neuropsychiatrybusiness.industryScatteringlcsh:Human anatomyzebrafishSample (graphics)striping artifactsAcousto optic deflector Brain imaging Fast volumetric imaging Light-sheet fluorescence microscopy Striping artifacts Zebrafish Anatomy Neuroscience (miscellaneous) Cellular and Molecular Neurosciencelight-sheet fluorescence microscopy030104 developmental biologyFeature (computer vision)Light sheet fluorescence microscopyAnatomybusiness030217 neurology & neurosurgeryNeuroscience
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Environmental epigenetics in zebrafish

2017

Abstract It is widely accepted that the epigenome can act as the link between environmental cues, both external and internal, to the organism and phenotype by converting the environmental stimuli to phenotypic responses through changes in gene transcription outcomes. Environmental stress endured by individual organisms can also enforce epigenetic variations in offspring that had never experienced it directly, which is termed transgenerational inheritance. To date, research in the environmental epigenetics discipline has used a wide range of both model and non-model organisms to elucidate the various epigenetic mechanisms underlying the adaptive response to environmental stimuli. In this rev…

0301 basic medicinelcsh:QH426-470Settore BIO/11 - Biologia MolecolareReviewEnvironmentEpigenesis GeneticEmbryogenesi03 medical and health sciences0302 clinical medicineEnvironmental epigeneticEnvironmental epigeneticsGeneticsAnimalsEpigeneticsToxicantZebrafishMolecular BiologyOrganismZebrafishDNA methylation; Embryogenesis; Environmental epigenetics; Histone modifications; Methylome; Toxicant; Transgenerational inheritance; Zebrafish; Molecular Biology; GeneticsGeneticsDNA methylationbiologyHistone modificationsInheritance (genetic algorithm)Adaptive responseEpigenomebiology.organism_classificationHuman geneticsHistone Codelcsh:Genetics030104 developmental biologyEvolutionary biologyDNA methylationEmbryogenesisMethylomeHistone modification030217 neurology & neurosurgeryTransgenerational inheritanceEpigenetics & Chromatin
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Preclinical models in oncological pharmacology: limits and advantages

2021

A wide range of experimental tumor models, each with distinct advantages and disadvantages, is nowadays available. Due to the inherent differences in their complexity and functionality, the choice of the model is usually dependent on the application. Thus, to advance specific knowledge, one has to choose and use appropriate models, which complexity is largely dependent on the hypotheses to test, that is on the objectives. Whatever the model chosen, the complexity of cancer is such that none of them will be able to fully represent it. In vitro tumor models have provided important tools for cancer research and still serve as low-cost screening platforms for drugs. The improved understanding o…

3D modelengineered mouse modelsmedicine.medical_specialty3D models3d modelcell linescell lineBiologyOncology; cell lines; 3D models; engineered mouse models; zebrafish models; immunocompromised mouse modelsengineered mouse modelzebrafish modelsOncologyOncology; cell lines; 3D models; engineered mouse models; zebrafish models; immunocompromised mouse models.medicineMedical physicsimmunocompromised mouse modelszebrafish model
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Polyphenol Characterization, Antioxidant and Skin Whitening Properties of Alnus cordata Stem Bark

2019

In this study, we investigated the phenolic composition of the crude extract (MeOH 80 %) of Alnus cordata (Loisel.) Duby stem bark (ACE) and its antioxidant and skin whitening properties. RP-LC-DAD analysis showed a high content of hydroxycinnamic acids (47.64 %), flavanones (26.74 %) and diarylheptanoids (17.69 %). Furthermore, ACE exhibited a dose-dependent antioxidant and free-radical scavenging activity, expressed as half-maximal inhibitory concentration (IC50 ): Oxygen radical absorbance capacity (ORAC, IC50 1.78 μg mL-1 )>Trolox equivalent antioxidant capacity (TEAC, IC50 3.47 μg mL-1 )>2,2-Diphenyl-1-picrylhydrazyl (DPPH, IC50 5.83 μg mL-1 )>β-carotene bleaching (IC50 11.58 μg mL-1 )…

AntioxidantOxygen radical absorbance capacityDPPHmedicine.medical_treatmentTrolox equivalent antioxidant capacityBioengineeringAlnus cordata; antimelanogenic activity; Betulaceae; mushroom tyrosinase; polyphenols; RP-LC-DAD analysis; zebrafish; Alnus; Animals; Antioxidants; Biphenyl Compounds; Enzyme Inhibitors; Monophenol Monooxygenase; Picrates; Plant Bark; Plant Extracts; Polyphenols; Skin; ZebrafishAlnus01 natural sciencesBiochemistryAntioxidantschemistry.chemical_compoundPicratesmedicineAnimalsFood scienceEnzyme InhibitorsMolecular BiologyIC50ZebrafishSkinbiologyMonophenol MonooxygenasePlant Extracts010405 organic chemistryBiphenyl CompoundsPolyphenolsSkin whiteningGeneral ChemistryGeneral Medicinebiology.organism_classificationAlnus cordata0104 chemical sciences010404 medicinal & biomolecular chemistrychemistryPolyphenolPlant BarkMolecular Medicine
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Stress reactivity elicits a tissue-specific reduction in telomere length in aging zebrafish (Danio rerio)

2020

ABSTRACTTelomere length reflects cellular ageing. Increased telomere shortening in leukocytes is associated with a range of neurodegenerative and cardiovascular diseases, the onset and progression of which may be mediated by behavioural traits such as anxiety and stress reactivity. However, the effects of the hypothalamus-pituitary-adrenal axis stress response are shown to be tissue specific. As such, leukocyte telomere length may not give an accurate measure of the relationship between stress-reactivity and telomere length in disease relevant tissues. To test the hypothesis that stress-reactivity contributes to age-related telomere shortening in a tissue specific manner, we examined the co…

Estrès0301 basic medicineMaleBiologiamedicine.medical_specialtyAgingHeart diseaseSciencePopulationDanioStressArticle03 medical and health sciences0302 clinical medicineInternal medicineGene expressionmedicineTissue specificAnimalseducationZebrafishTelomere ShorteningZebrafish030304 developmental biology0303 health scienceseducation.field_of_studyMultidisciplinarybiologyMechanism (biology)QRNeural ageingTelomerebiology.organism_classificationmedicine.diseaseAging; Animals; Male; Stress Psychological; Telomere; Telomere Shortening; ZebrafishCardiovascular biologyTelomereAgeing030104 developmental biologyEndocrinologyReal-time polymerase chain reactionAgeingMedicinePsychologicalStress Psychological030217 neurology & neurosurgery
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Dual-beam confocal light-sheet microscopy via flexible acousto-optic deflector

2019

Confocal detection in digital scanned laser light-sheet fluorescence microscopy (DSLM) has been established as a gold standard method to improve image quality. The selective line detection of a complementary metal-oxide-semiconductor camera (CMOS) working in rolling shutter mode allows the rejection of out-of-focus and scattered light, thus reducing background signal during image formation. Most modern CMOS have two rolling shutters, but usually only a single illuminating beam is used, halving the maximum obtainable frame rate. We report on the capability to recover the full image acquisition rate via dual confocal DSLM by using an acoustooptic deflector. Such a simple solution enables us t…

Image formationPaperMaterials scienceImage qualityConfocalBiomedical Engineeringacousto-optic deflector; confocal detection; digital scanned laser light-sheet fluorescence microscopy; high contrast; high-throughput microscopy; light-sheet microscopy; mouse brain; zebrafish brainconfocal detection01 natural scienceslaw.invention010309 opticsBiomaterialsMiceacousto-optic deflectorOpticslaw0103 physical sciencesMicroscopyImage Processing Computer-AssistedAnimalsZebrafishhigh-throughput microscopyconfocal light-sheet microscopyMicroscopyMicroscopy Confocalbusiness.industryhigh contrastRolling shutterBrainEquipment DesignLaserFrame ratezebrafish brainAtomic and Molecular Physics and OpticsElectronic Optical and Magnetic MaterialsHigh-Throughput Screening AssaysMice Inbred C57BLdigital scanned laser light-sheet fluorescence microscopyMicroscopy FluorescenceLight sheet fluorescence microscopyLarvamouse brainbusinesslight-sheet microscopyJournal of Biomedical Optics
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Ovarian senescence increases liver fibrosis in humans and zebrafish with steatosis

2015

ABSTRACT Contrasting data exist on the effect of gender and menopause on the susceptibility, development and liver damage progression in non-alcoholic fatty liver disease (NAFLD). Our aim was to assess whether menopause is associated with the severity of liver fibrosis in individuals with NAFLD and to explore the issue of ovarian senescence in experimental liver steatosis in zebrafish. In 244 females and age-matched males with biopsy-proven NAFLD, we assessed anthropometric, biochemical and metabolic features, including menopausal status (self-reported); liver biopsy was scored according to ‘The Pathology Committee of the NASH Clinical Research Network’. Young and old male and female zebraf…

Liver CirrhosisMaleFibrosiBiopsyPhysiologylcsh:MedicineMedicine (miscellaneous)Body Mass IndexCohort StudiesImmunology and Microbiology (miscellaneous)FibrosisNon-alcoholic Fatty Liver DiseaseRisk FactorsOdds RatioZebrafishCellular Senescencemedicine.diagnostic_testAnthropometryFatty liverMiddle AgedOvarian senescenceMenopauseLiver biopsyModels AnimalDisease ProgressionFemaleMenopauselcsh:RB1-214Research ArticleSenescenceAdultmedicine.medical_specialtyFibrosis Menopause Non-alcoholic fatty liver disease Ovarian senescence ZebrafishNeuroscience (miscellaneous)Fibrosis; Menopause; Non-alcoholic fatty liver disease; Ovarian senescence; Zebrafish; Biochemistry Genetics and Molecular Biology (all); Medicine (miscellaneous); Immunology and Microbiology (miscellaneous); Neuroscience (miscellaneous)BiologyReal-Time Polymerase Chain ReactionGeneral Biochemistry Genetics and Molecular BiologyInternal medicinemedicinelcsh:PathologyAnimalsHumansAgedBiochemistry Genetics and Molecular Biology (all)lcsh:RSettore MED/09 - MEDICINA INTERNAOvaryOdds ratiomedicine.diseaseFibrosisEndocrinologySteatosisBody mass indexDisease Models & Mechanisms
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